1. Personal Information First Name : Mourad Last Name : Elloumi Gender : Male Date and Place of Birth : April 20, 1962 in Tunis, Tunisia. Citizenship : Tunisian Profession : Full Professor in Computer Science Current Affiliation : College of Computing and Information Technologies (CCIT), University of Bisha (UB), Kingdom of Saudi Arabia. Previous Affiliation : Faculty of Economic Sciences and Management of Tunis (FSEGT), University of Tunis-El Manar (UTM), Tunisia. Whatsup: +216 55 20 04 62 E.mail : Mourad.Elloumi@gmail.com Blog : http://mourad-elloumi.blogspot.com/ 2. Academic Qualifications • 2003 : Habilitation for conducting research in Computer Science, National School of Informatics (ENSI), University of Manouba, Tunisia. • 1994 : PhD in Computer Science, University of Aix-Marseilles III, France. • 1989 : Master's Degree in Computer Science, University of Aix-Marseilles III, France. • 1988 : Master's Degree in Computer Engineering, Faculty of Sciences of Tunis (FST), UTM, Tunisia. 3. Professional Experience ● Full Professor in Computer Science at the CCIT, UB, since January 2020. ● Full Professor in Computer Science at the FSEGT, UTM, from February 2011 to January 2020. ● Associate Professor in Computer Science at the FSEGT, UTM, from October 2005 to February 2011. ● Assistant Professor in Computer Science at the FSEGT, UTM, from September 1997 to October 2005. ● Teaching Assistant in Computer Science at the FSEGT, UTM, from September 1995 to September 1997. 4. Experience in Teaching Teachings at the FSEGT, UTM, since September 1995, as a permanent lecturer, and teachings in other academic institutions, as a temporary/contractual lecturer: ● CCIT : 20-Present ● ENSIT : 06–07 → 10-11 ● FST : 04–05 and 05–06 ● National School of Engineers of Tunis (ENSI) : 03–04 5. Invited Professor ● Invited Professor at The University of Pisa (UniPi), Italy, for a period of twelve (12) days in 2019. ● Invited Professor at Institut de Recherche en Informatique et Systèmes Aléatoires (IRISA), University of Rennes, Rennes 1, France, for a period of five (5) days in 2018. ● Invited Professor at the Laboratoire des Sciences du Numériques de Nantes (LS2N), University of Nantes, Nantes, France, for a period of nineteen (19) days in 2017. ● Invited Professor at the Department of Computer Science, Indian School of Mines (ISM), Dhanbad, India, for a period of thirty-two (32) days in 2014-2015. ● Invited Professor at The Exelixis Lab, Heidelberg Institute for Theoretical Studies (HITS), Heidelberg, Germany, for a period of eighteen (18) days in 2014. ● Invited Professor at the Department of Informatics, King’s College London, London, UK, for a period of thirty-five (35) days in 2011. ● Invited Professor at the Laboratoire d'Etude et de Recherche en Informatique d'Angers (LERIA), University of Angers, Angers, France, for a period of fifteen (15) days in 2010. ● Invited Professor at the Dipartimento di Matematica ed Informatica (DIMI), University of Udine, Udine, Italy, for a period of fifteen (15) days in 2007. 6. Main Research Topics ● Algorithmics ● Computational Molecular Biology ● Medical Informatics ● Artificial Intelligence 7. Supervision of PhD Theses ● Number of theses defended: 10 Thesis 1. Title : Algorithms for Knowledge Extraction from Biological Data Student : Fawzi Mhamdi Supervisor(s) : Mourad Elloumi Date of Defense : February 27, 2010 Distinction : Very honorable Thesis 2. Title : Heuristics and Metaheuristics for Microarray Data Biclustering Student : Wassim Ayadi Supervisor(s) : Mourad Elloumi and Jin-Kao Hao (University of Angers, France) Date of Defense : December 2, 2011 Distinction : Very honorable Thesis 3. Title: Motif Finding in Strings Coding Biological Macromolecules: Case of Simple Motifs Student : Tarek El Faleh Supervisor(s) : Mourad Elloumi and Thierry Lecroq (University of Rouen, France) Date of Defense : July 12, 2012 Distinction : Very honorable Thesis 4. Title : Alignment of Strings Coding Biological Macromolecules Student : Ahmed Mokaddem Supervisor(s) : Mourad Elloumi Date of Defense : May 6, 2014 Distinction : Very honorable Thesis 5. Title : Biclustering Algorithms of Microarray Data Student: Haifa Ben Saber Supervisor(s) : Mourad Elloumi Date of Defense : March 19, 2016 Distinction : Very honorable Thesis 6. Title : Algorithms of Construction of an Indexing Structure for Next-Generation Sequencing Data Student: Nadia Ben Nsira Supervisor(s) : Mourad Elloumi and Thierry Lecroq (University of Rouen, France) Date of Defense : December 5, 2017 Distinction : Very honorable Thesis 7. Title : Effect of Regulations in the Metabolic Networks Student: Hanen Mhamdi Supervisor(s) : Mourad Elloumi, Jérémie Bourdon and Abdelhalim Larlhimi (University of Nantes) Date of Defense : March 20, 2021 Distinction : Very honorable Thesis 8. Title : Algorithms of Genome Analysis and Detection of DNA Variants Responsible for Multifactorial Diseases Student: Hend Amraoui Supervisor(s) : Mourad Elloumi and Faouzi Mhamdi Date of Defense : July 26, 2022 Distinction : Very honorable Thesis 9. Title : Visual Analysis Algorithms of Biclustering Results of Gene Expression Data Student: Haithem Aouabed Supervisor(s) : Mourad Elloumi and Rodrigo Santamaría (University of Salamanca, Spain) Date of Defense : April 6, 2024 Distinction : Very honorable Thesis 10. Title : Multiple and Equivalent Solutions Extraction for Biomedical Data Classification Problems Student: Naouel Gannouni Supervisor(s) : Mourad Elloumi, Faouzi Mhamdi and Emanuel Weitschek (University of Rome 3, Italy) Date of Defense : April 13, 2024 Distinction : Very honorable 8. Supervision of Masters ● Number of masters defended: 15 Master 1. Title : Algorithms of DNA Assembly Student : Safa Kaâbi Supervisor : Mourad Elloumi Date of Defense : December 12, 1998 Distinction : Very good Master 2. Title : Algorithms of Construction of a Longest Common Subsequence to a Set of Strings Student : M’barek Tarchi Supervisor : Mourad Elloumi Date of Defense : July 15, 2005 Distinction: Good Master 3. Title : Algorithms of Comparison of Strings Coding Biological Macromolecules Student: Ahmed Mokaddem Supervisor : Mourad Elloumi Date of Defense : June 2, 2008 Distinction : Very good Master 4. Title : Algorithms for the Minimum Fragment Removal Problem Student : Amira Mnif Supervisor : Mourad Elloumi Date of Defense : February 19, 2009 Distinction : Good Master 5. Title : Algorithms of Multiple Global Alignment of Biological Sequences Student : Soumaya Hosni Supervisor : Mourad Elloumi Date of Defense : November 6, 2009 Distinction : Very good Master 6. Title : Motif Search Algorithms in a Set of Strings Coding Biological Macromolecules Student: Wiem Trabelsi Supervisor : Mourad Elloumi Date of Defense : February 22, 2010 Distinction : Good Master 7. Title : String Barcoding Student : Farouk Jelidi Supervisor : Mourad Elloumi Date of Defense : May 21, 2010 Distinction : Very good Master 8. Title : Construction of a Shortest Common Superstring and DNA Sequence Assembly Student: Sofien Melki Supervisor : Mourad Elloumi Date of Defense : May 21, 2010 Distinction: Good Master 9. Title : Algorithms for the Problem of Genomes Rearrangement by Inversion Student: Sana Samet Supervisor : Mourad Elloumi Date of Defense : December 5, 2013 Distinction: Good Master 10. Title : Algorithms for Multiple Sequence Alignment based on a Biclustering Technique Student: Chaima Neffati Supervisor : Mourad Elloumi and Wassim Ayadi Date of Defense : February 21, 2014 Distinction: Good Master 11. Title : Algorithms of Multiple Alignments Refinement Student: Marwa Ghnim Supervisors : Mourad Elloumi and Tarek El Faleh Date of Defense : January 29, 2015 Distinction : Good Master 12. Title : New Index Structures to Detect Motifs in Biological Sequences Student: Khaled Fayala Supervisors : Mourad Elloumi and Tarek El Faleh Date of Defense : January 29, 2015 Distinction : Good Master 13. Title : Graphical Representation of Protein Networks Student: Yasmine Bahri Supervisors : Karim Mezhoud and Mourad Elloumi Date of Defense : January 29, 2015 Distinction : Good Master 14. Title : Algorithm to Hide a Secret Text in a DNA Sequence Student: Ammar Matar M. Alqurashi Supervisors : Mourad Elloumi Date of Defense : November 11, 2022 Distinction : Very Good Master 15. Title : Algorithm to Hide a Secret Text in a DNA Sequence Student: Ahood Abdullah S. Alshahrani Supervisors : Mourad Elloumi Date of Defense : September, 2025 Distinction : Very Good 9. Participation to Masters in Computer Science ● Course in the framework of the master in Computer Science of the ENSIT, entitled Algorithms on Biological Sequences (30 hours) : 06–07 → 10-11. ● Course in the framework of the master in Computer Science of the FST, entitled Algorithms on Strings (14 hours) : 04–05 and 05–06. 10. Participation to Habilitations, PhD Theses and Masters Juries Academic Habilitations and Promotions ● Reviewer of : 1. Application of Farhana Zulkernine for the promotion to the rank of Continuing Associate Professor in Computer Science, School of Computing, Queen's University, Kingston, Ontario, Canada : (September 2019). 2. Application of Mohammed Al-Rashoudi for the promotion to the rank of Associate Professor in Computer Science, Qassim University, Saudi Arabia: (June 2020). 3. Academic habilitation in Biology of Kais Guédira, Pasteur Institute of Tunis, Tunisia: (January 2021). 4. Application of Mohammad Alnabhan for the promotion to the rank of Full Professor in Computer Science, Mu'tah University, Karak, Jordan: (February 2021). 5. Application of Adil Ali Abdelaziz Saed for the promotion to the rank of Associate Professor in Computer Science, International University of Africa, Khartoum, Sudan: (October 2025). 6. Application of Malek Nasser Ali Al-gabri for the promotion to the rank of Full Professor in Computer Science, Sana’a University, Sana’a, Yemen: (October 2025). ● Examiner of : 1. Academic habilitation in Computer Science of Sadok Ben Yahia (FST, July 2008). PhD Theses Participation to more than twenty five (25) juries of PhD theses in Computer Science : ● Reviewer of the PhD theses of : 1. Mariem Siala (INSA Lyon, France, June 2008) 2. Mariem Ennigrou (ISGT, April 2010) 3. Inès Hamdi (ENSI, May 2010) 4. Tai-Chun Wang (University of Sydney, Australia, December 2011) 5. Samir Arem (FSEGT, February 2013) 6. Emanuel Weitschek (Sapienza, Università di Roma, Italy, April 2013) 7. Amel Ghouila (University of Montpellier 2, France, December 2013) 8. Ouafae Kaissi (University Abdelmalek Essaadi, Tangier, Morocco, September 2014) 9. Priyanka Rajput (Maulana Azad National Institute of Technology, Bhopal, India, October 2015) 10. Giulia Fiscon (Sapienza, Università di Roma, Italy, December 2015) 11. Ankit Vidhyarthi (Malaviya National Institute of Technology, Jaipur, India, October 2016) 12. Khaoula Bezzina (FST, April 2019) 13. Saber Amri (Faculty of Sciences of Sfax (FSS), May 2019) 14. U. Vignesh (Vellore Institute of Technology (VIT, Vellore, Tamil Nadu, India), May 2019) 15. Roman Zoun (University of Magdeburg, Germany, January2020) 16. Prashant Pranav (Birla Institute of Technology, Ranchi, India, June2020) 17. Venubabu Rachapudi (Andhra University College of Engineering, Andhra Pradesh, India, December 2020) 18. Sana Ezouaoui (FST, October 2022) 19. Zeineb Fki (National Engineering School of Sfax (ENIS), September 2023) 20. Emma Qumsiyeh (Al-Quds University, Jerusalem, Palestine August 2024) ● Examiner of the PhD thesis of : 21. Moez Ben Haj Hmida (FST, December 2012) ● Supervisor of the PhD thesis of : 22. Fawzi Mhamdi (FST, February 2010) 23. Wassim Ayadi (University of Angers, France, December 2011) 24. Tarek El Faleh (University of Rouen, France, July 2012) 25. Ahmed Mokaddem (FST, May 2013) 26. Haifa Ben Saber (FSEGS, March 2016) 27. Nadia Bennsira (University of Rouen, France, December 2017) 28. Hanen Mhamdi (University of Nantes, France, March 2021) 29. Hend Amraoui (FST, July 2022) 30. Haithem Aouabed (FSEGS, April 2024) 31. Naouel Gannouni (FST, April 2024) Masters Chairing more than forty (40) juries of masters in Computer Science: 11. Evaluation of Scientific Papers and Projects ■ Evaluation of papers submitted to the following journals : ● BMC Bioinformatics, BioMed Central, London, UK ● Journal of Computational Biology, Mary Ann Liebert, Inc., Publishers. (New York, USA) ● Briefings in Bioinformatics, Oxford University Press. (Oxford, UK) ● Theoretical Computer Science, Elsevier Publishing Co. (Amsterdam, North-Holland) ● RAIRO-Operations Research (London, UK) ● BioDatamining, BioMed Central Publisher (London, UK) ● IEEE/ACM Transactions on Computational Biology and Bioinformatics (Washington, DC, USA) ● Annals of Software Engineering, Baltzer Science Publishers (Bussum, The Netherlands) ● Bioinformatics, Oxford University Press (Oxford, United Kingdoom) ● IEEE Software (Los Alamitos, California, USA) ● IEEE Transactions on NanoBioscience (Piscataway, New Jersey, USA) ● International Journal of Computing and Information Sciences, Elsevier Publishing Co. (Amsterdam, North-Holland) ● Journal of Intelligent Systems, Freund & Pettman Publishing House (Hull, East Yorkshire, England) ● Knowledge Based Systems Journal, Elsevier Publishing Co. (Amsterdam, North-Holland) ● Mathematical Problems in Engineering, Hindawi Publishing Corporation (New York, USA) ■ Expert Reviewer: ● Expert Reviewer of projects submitted to the European Science Foundation (ESF), Strasbourg, France (Since 2018). ● External Academic Expert on the Board of Studies (BoS) for Bachelor of Technology (B. Tech) in Computer Science Engineering with a specialization in Artificial Intelligence & Machine Learning (CSE-AIML) program, School of Engineering & Technology, MNR University, Hyderabad, India (Since 2025). ● Expert Reviewer of projects submitted to the Natural Sciences and Engineering Research Council of Canada (NSERC), Ottawa, Ontario, Canada (Since 2025). 12. Grants • 2021 G2. Grant from the Deputyship for Research and Innovation, Ministry of Education in Saudi Arabia for funding the research project, entitled Error Correction Algorithms in Next-Generation Sequencing Data, number UB-07-1442: (March 2021). G1. Grant from the Deputyship for Research and Innovation, Ministry of Education in Saudi Arabia for funding the research project, entitled Steganography in Medical Images, number UB-05-1442: (January 2021). 13. Books and Proceedings ● Deep Learning for Biomedical Data Analysis: Techniques, Approaches and Applications, M. Elloumi (Ed.), Springer, Heidelberger, Germany (Publish.) : (April 2021). ● Proceedings of the 29th International Conference on Database and Expert Systems Applications, DEXA'18 workshops (Regensburg, Germany), M. Elloumi et al. (Eds.), Communications in Computer and Information Science (CCIS), Springer-Verlag, Heidelberg, Germany (Publish.) : (September 2018). ● Algorithms for Next-Generations Sequencing Data: Techniques, Approaches and Applications, M. Elloumi (Ed.), Springer, Heidelberger, Germany (Publish.) : (September 2017). ● Pattern Recognition in Computational Molecular Biology: Techniques and Approaches, M. Elloumi, C. S. Iliopoulos, J. T. L. Wang, A. Y. Zomaya (Eds.), Wiley Book Series on Bioinformatics: Computational Techniques and Engineering, Wiley-Blackwell, John Wiley & Sons Ltd., New Jersey, USA (Publish.) : (February 2016). ● Biological Knowledge Discovery Handbook: Preprocessing, Mining and Postprocessing of Biological Data, M. Elloumi, A. Y. Zomaya (Eds.), Wiley Book Series on Bioinformatics: Computational Techniques and Engineering, Wiley-Blackwell, John Wiley & Sons Ltd., New Jersey, USA (Publish.) : (January 2014). ● Algorithms in Computational Molecular Biology : Techniques, Approaches and Applications, M. Elloumi, A. Y. Zomaya (Eds.), Wiley Book Series on Bioinformatics : Computational Techniques and Engineering, Wiley-Blackwell, John Wiley & Sons Ltd., New Jersey, USA (Publish.) : (February 2011). ● Recent Patents on DNA and Gene Sequence Journal, Special Issue on Pattern Finding in Computational Molecular Biology, Vol. 7, No. 2, M. Elloumi (Guest Editor), Bentham Science Publishers, Bussum, The Netherlands (Publisher) : (2013). ● Knowledge Based Systems Journal, Special Issue on Biological Knowledge Discovery and Data Mining, Vol. 15, Issue 4, M. Elloumi (Guest Editor), Elsevier Publishing Co., Amsterdam, North-Holland (Publisher) : (May 2002) ● Proceedings of the 2nd International Conference on Bioinformatics Research and Development, BIRD’08 (Vienna, Austria), M. Elloumi et al. (Eds.), Communications in Computer and Information Science (CCIS), Springer-Verlag, Heidelberg, Germany (Publish.) : (July 2008). 14. Workshops Organization ● Biological Knowledge Discovery and Data Mining, BIOKDD'19, 30th International Conference on Database and Expert Systems Applications, DEXA'19 (Linz, Austria) : (August 2019). ● Biological Knowledge Discovery and Data Mining, BIOKDD'18, 29th International Conference on Database and Expert Systems Applications, DEXA'18 (Regensburg, Germany) : (September 2018). ● Biological Knowledge Discovery and Data Mining, BIOKDD'17, 28th International Conference on Database and Expert Systems Applications, DEXA'17 (Lyon, France) : (Août 2017). ● Biological Knowledge Discovery and Data Mining, BIOKDD'16, 27th International Conference on Database and Expert Systems Applications, DEXA'16 (Porto, Portugal) : (September 2016). ● Biological Knowledge Discovery and Data Mining, BIOKDD'15, 26th International Conference on Database and Expert Systems Applications, DEXA'15 (Valencia, Spain) : (September 2015). ● Biological Knowledge Discovery and Data Mining, BIOKDD'14, 25th International Conference on Database and Expert Systems Applications, DEXA'14 (Munich, Germany) : (September 2014). ● Biological Knowledge Discovery and Data Mining, BIOKDD'13, 24th International Conference on Database and Expert Systems Applications, DEXA'13 (Prague, Czech Republic) : (August 2013). ● Biological Knowledge Discovery and Data Mining, BIOKDD'12, 23rd International Conference on Database and Expert Systems Applications, DEXA'12 (Vienna, Austria) : (September 2012). ● Biological Knowledge Discovery and Data Mining, 22nd International Conference on Database and Expert Systems Applications, DEXA'11 (Toulouse, France) : (September 2011). ● Algorithms and Bioinformatics, 8th ACS/IEEE International Conference on Computer Systems and Applications, AICCSA’10 (Hammamet, Tunisia) : (May 2010). ● Biological Knowledge Discovery and Data Mining, 20th International Conference on Database and Expert Systems Applications, DEXA'09 (Linz, Austria) : (September 2009). ● Algorithms in Molecular Biology, 2nd International Conference on Bioinformatics Research and Development, BIRD'08 (Vienna, Austria) : (September 2008). ● Biological Knowledge Discovery from Databases, Atlantic Symposium on Computational Biology and Genome Information Systems & Technology, CBGI'03 (Cary, North Carolina, USA) : (September 2003). ● Knowledge Discovery and Data Mining in Biological Databases, The 2001 International Conference on Mathematics and Engineering Techniques in Medicine and Biological Sciences, METMBS'01 (Las Vegas, Nevada, USA) : (June 2001). 15. Teaching Activities Teaching Graduate Level Nature Number of Hours Institution Years Data Science Pre 4th year, Computer Engineering (CE4) Lectures, Practical 45 CCIT 25-26 Cybersecurity Fundamentals Post Master in Cybersecurity (MSc. Cyb) Lectures, Practical 90 CCIT 24-26 Machine Learning Post MSc. Cyb Lectures, Practical 90 CCIT 20-22 Research Methodology Post MSc. Cyb Lectures, Practical 30 CCIT 20-22 Intelligent Robots Pre CE4 Lectures, Practical 45 CCIT 24-25 Enterprise Resource Planning Pre CE4 Lectures 30 CCIT 21-25 Optimization Principles and Algorithms Pre CE4 Lectures 30 CCIT 22-25 Social Engineering Pre CE4 Lectures 30 CCIT 23-24 Natural Language Processing Pre CE4 Lectures, Practical 45 CCIT 23-24 Systems Analysis and Design Pre CE4 Lectures, Practical 45 CCIT 21-23 Summary Table of Teaching Activities (Part 1) Teaching Grade Level Nature Number of Hours Institution Years Computer Skills Pre CE4 Lectures 30 CCIT 20-21 Design and Analysis of Algorithms Pre FLMI1 Lectures, Practical 45 CCIT 20-22 Information Systems Pre CE4 Lectures 30 CCIT 21-22 Distributed Information Systems Pre CE4 Lectures 30 CCIT 22-23 Operational Research Pre CE4 Lectures, Practical 45 CCIT 22-23 Object-Oriented Programming: C++ Pre CE4 Lectures, Practical 60 ENSIT 00-01 Pre FLMI3 Lectures 30 FSEGT 03-19 Pre FLMI2 Lectures 30 FSEGT 09-19 Algorithmic Complexity Pre FLMI3 Lectures 45 FSEGT 03-19 Languages and Compilation Pre FLMI3 Lectures 45 FSEGT 03-19 Theory of Languages and Automata Pre FLMI2 Lectures 30 FSEGT 09-19 Algorithmics and Data Structures 2 Pre CE4 Lectures, Practical 45 ENSI 03-04 Pre FLMI2 Lectures 45 FSEGT 02–09 Pre FLMI1 Lectures 30 FSEGT 08–19 Summary Table of Teaching Activities (Part 2) Teaching Grade Level Nature Number of Hours Institution Years Algorithmics and Data Structures 1 Pre FLMI1 Lectures 30 FSEGT 08-10 Computer Systems Pre FLMI1 Lectures 45 FSEGT 01-08 Computer Architectures Pre FLMI1 Lectures 30 FSEGT 08-19 Logics Pre FLMI1 Lectures 30 FSEGT 01-08 General Informatics Pre 3rd year, Economic Sc. Lectures, Practical 30 FSEGT 95-99 Summary Table of Teaching Activities (Part 3) 16. List of Papers International Journals • 2026 J43. [Hamdi et al. 26] : M. Hamdi, N. Alduaiji, M. Elloumi, S. Asklany, F. Almutairy, N. M. Alotaibi, A. Yousef, G. Abbas, A Novel Complemented Input Matching Model for Accurate and Timely Emotion Recognition, Ain Shams Engineering Journal, Volume 17, Issue 3, Elsevier Publishing Co., Amsterdam, North-Holland (Publish.) : (March 2026). https://doi.org/10.1016/j.asej.2026.103987 Quartile: Q1 https://www.scimagojr.com/journalsearch.php?q=19700200705&tip=sid J42. [Ahmad et al. 26] : N. Ahmad, M. Kaleem, M. Elloumi, M. A. Mushtaq, A. Fatnassi, M. Fazil, A. Bilal, A. A. Darem, A Comprehensive Literature Review of AI-Driven Application Mapping and Scheduling Techniques for Network-on-Chip Systems, Computer Modeling in Engineering & Sciences (CMES), Vol. 146, No. 1, Tech Science Press (TSP), Henderson, USA (Publish.) : (29 January 2026). https://doi.org/10.32604/cmes.2025.074902 Quartile: Q1 https://www.techscience.com/journal/CMES • 2025 J41. [Khan et al. 25] : W. Khan, N. Ebrahim, M. Alsaadi, M. Elloumi, Unified Representation and Scoring Framework for Anomaly Detection in Attributed Networks with Emphasis on Structural Consistency and Attribute Integrity, Scientific Reports, 15, Article number: 35753, Nature Portfolio, Springer, Heidelberger, Germany (Publish.) : (October 2025). https://doi.org/10.1038/s41598-025-19650-y Quartile: Q1 https://www.scimagojr.com/journalsearch.php?q=21100200805&tip=sid J40. [Alharthi et al. 25] : A. M. Alharthi, F. S. Altuwaijri, M. Alsaadi, M. Elloumi, A. A. M. Al-Kubati, Cross-Layer Controller Tasking Scheme Using Deep Graph Learning for Edge-Controlled Industrial Internet of Things (IIoT), Future Internet, Vol. 17, No. 8, MDPI, Basel, Switzerland (Publisher) : (30 July 2025). https://doi.org/10.3390/fi17080344 Quartile: Q2 https://www.scimagojr.com/journalsearch.php?q=21100409311&tip=sid J39. [Najjari et al. 25] : A. Najjari, Ch. Naccache, N. Abdelkefi, S. Djebbi, A. Souii, B. Chermiti, M. Elloumi, M. Mezghani-Khemakhem, Microbiota of the Whitefly Bemisia tabaci (Hemiptera: Aleyrodidae) by 16S rDNA Illumina Sequencing, Microbiology Research, Vol. 16, No. 7, MDPI, Basel, Switzerland (Publisher) : (19 July 2025). https://doi.org/10.3390/microbiolres16070163 Quartile: Q3 https://www.scimagojr.com/journalsearch.php?q=21100853989&tip=sid&clean=0 J38. [Ebrahim et al. 25] : N. Ebrahim, M. Elloumi, A. M. Alharthi, F. S. Altuwaijri, M. Alsaadi, Offloading-Verified Framework for Adversary Detection and Mitigation in IoT, Applied Soft Computing, Vol. 177, Article No. 113312, Elsevier Publishing Co., Amsterdam, North-Holland (Publisher): (June 2025). https://doi.org/10.1016/j.asoc.2025.113312 Quartile: Q1 https://www.scimagojr.com/journalsearch.php?q=18136&tip=sid&clean=0; J37. [Ahmad et al. 25] : M. A. Ahmad, E. Al-Qhtani, A. H. Samak, A. Ibrahim, M. Elloumi, A. Ahmed, Deep Learning-Based Steganalysis for Detection and Classification of Possible Hidden Content in Images, Fusion: Practice and Applications (FPA), Vol. 17, Issue 2, New Orleans, USA: (January 2025), p377-393. https://doi.org/10.54216/FPA.170228 Quartile: Q4 https://www.scimagojr.com/journalsearch.php?q=21101134649&tip=sid&clean=0 • 2024 J36. [Aouabed et al. 24] : H. Aouabed, M. Elloumi, F. Algarni, Biclustering Results Visualization of Gene Expression Data: A Review, Journal of Engineering Research and Sciences (JENRS), Vol. 3, Issue 10, Sheridan, Wyoming, USA: (November 2024), p55-68. • 2023 J35. [Aouabed and Elloumi 23] : H. Aouabed, M. Elloumi, Visualizing Biclusters of Gene Expression Data and Their Overlaps Based on a Two-Dimensional Matrix Technique, Computational Biology and Bioinformatics J., Vol. 11, No2, Science Publishing Group, New York, USA (Publisher) : (October 2023). • 2022 J34. [Ahmad et al. 22] : M. A. Ahmad, M. Elloumi, A. H. Samak, A. M. Al-Sharafi, A. Alqazzaz, M. A. Kaid, C. Iliopoulos, Hiding Patients’ Medical Reports Using an Enhanced Wavelet Steganography Algorithm in DICOM Images, Alexandria Engineering Journal, Vol. 61, Issue 12, Elsevier Publishing Co., Amsterdam, North-Holland (Publisher) : (December 2022), p10577-10592. J33. [Elloumi et al. 22] : M. Elloumi, M. Ahmad, A. Samak, A. Al-Sharafi, D. Kihara, Ahmed I. Taloba, Error Correction Algorithms in Non-Null Aspheric Testing Next Generation Sequencing Data, Alexandria Engineering Journal, Vol. 61, Issue 12, Elsevier Publishing Co., Amsterdam, North-Holland (Publisher) : (December 2022), p9819-9829. • 2021 J32. [Aouabed et al. 21] : H. Aouabed, M. Elloumi, R. Santamaria, An Evaluation Study of Biclusters Visualization Techniques of Gene Expression Data, Journal of Integrative Bioinformatics, Vol. 18, Issue 4, De Gruyter, Berlin, Germany (Publisher) : (December 2021). • 2020 J31. [Aouabed et al. 20] : H. Aouabed, R. Santamaria, M. Elloumi, VisBicluster: A Matrix-Based Bicluster Visualization of Expression Data, Journal of Computational Biology, Vol. 27, No. 9, Mary Ann Liebert, Inc., New Rochelle, New York, USA (Publisher) : (September 4, 2020), p1384-1396. J30. [Mhamdi et al. 20] : H. Mhamdi, J. Bourdon, A. Larhlimi, M. Elloumi, Bayesian Integrative Modeling of Genome-Scale Metabolic and Regulatory Networks, Informatics, Vol. 7, Issue 1, MDPI, Basel, Switzerland (Publisher) : (January 2020). • 2019 J29. [Mokaddem et al. 19] : A. Mokaddem, A. Belhaj, M. Elloumi, Refin-Align: New Refinement Algorithm For Multiple Sequence Alignment, Informatica, An International Journal of Computing and Informatics, Slovenian Society Informatika, Vol. 43, N°4, Ljubljana, Slovenia (Publisher) : (2019), p527-534. J28. [Aghai-Maybodi et al. 18] : S. Ahmadian, G. Eslami, A. Fatahi, S. S. Hosseini, M. Vakili, V. A. Fahadan &, M. Elloumi, J-Binding Protein 1 and J-Binding Protein 2 Expression in Clinical Leishmania Major no Response-Antimonial Isolates, Journal of Parasitic Diseases, Vol. 43, Springer, Heidelberger, Germany (Publish.) : (2019), p39-45. • 2018 J27. [Aghai-Maybodi et al. 18] : M. Aghai-Maybodi, G. Eslami, M. Tohidfar, A. Fattahi-Bafghi, S. S. Hosseini, S. Ahmadian, M. Elloumi, Molecular Characterization of Clinical Leishmania Major Isolates Harboring ITS1 Homology Similar to the One in Crithidia spp, Journal of Isfahan Medical School, Vol. 36, No 500, Vesnu Publications Isfahan, Iran (Publish.) : (2018), p39-45. J26. [Eshratkhah et al. 18] : A. Eshratkhah Mohammadnejad, G. Eslami, F. Shamsi 3, A. Pirnejad, A. Samie, J. Safabakhsh, A. Sakhavand, M. Elloumi, Prevalence of Food-Borne Toxoplasma in Pregnant Women Population of Urmia, Iran, Journal of Food Quality and Hazards Control, Vol. 5, Shahid Sadoughi University of Medical Sciences, Yazd, Iran (Publish.) : (2018), p17-23. J25. [Ajamein et al. 18] : V. Ajamein, G. Eslami, S. Ahmadian, A. Khamesipour, M. Elloumi, Gene Expression of RNAP II, JBP1 and JBP2 in Leishmania Major Exposed to Antimonials, Amphotericin B and Paromomycin, Annals of Parasitology, Vol. 64, Issue 3, Polish Parasitological Society, Poland (Publish.) : (2018), p181-187. J24. [Kchouk et al. 18] : M. Kchouk, M. Elloumi, An Error Correction and DeNovo Assembly Approach for Nanopore Reads Using Short Reads, Current Bioinformatics, Vol. 13, Issue 3, Bentham Science, Sharjah, UAE (Publish.) : (2018), p241-252. J23. [Aouabed et al. 18] : H. Aouabed, R. Santamaria, M. Elloumi, Biclustering Impact in Biomedical Sciences via Literature Mining, International Journal of Biomedical Data Mining, Vol. 7, N° 1, OMICS International, Heathrow, UK (Publisher) : (August 2018). • 2017 J22. [Amraoui et al. 17] : H. Amraoui, F. Mhamdi, M. Elloumi, Survey of Metaheuristics and Statistical Methods for Multifactorial Diseases Analyses, AIMS Medical Science Journal, Vol. 4, Issue 3, AIMS Press, Springfield, Missouri, USA (Publisher) : (August 2017), p291-331. J21. [Kchouk et al. 17] : M. Kchouk, J. F. Gibrat, M. Elloumi, Generations of Sequencing Technologies: From First to Next Generation, Biology and Medicine, Vol. 9, Issue 3, BiolMed Publishing, Portland, USA (Publish.) : (March 2017), p1-8. J20. [Ben Nsira et al. 17] : N. Ben Nsira, M. Elloumi, Th. Lecroq, On-line String Matching in Highly Similar DNA Sequences, Mathematics in Computer Science (MCS) Journal, Vol. 11, N°2, Springer-Verlag, Heidelberg, Germany (Publisher) : (February 2017), p113-126. • 2015 J19. [Ben Saber and Elloumi. 15] : H. Ben Saber, M. Elloumi. A Novel Biclustering Algorithms of Binary Microarray Data : Bibincons and Bibinalter, BioData Mining Journal, Vol. 8, N°38, Springer Science+Business Media, Berlin, Germany (Publish.): (November 2015). J18. [Ben Saber and Elloumi. 15c] : H. Ben Saber, M. Elloumi. DNA Microarray Data Analysis: A New Survey on Biclustering. International Journal of Computational Biology (IJCB), Vol 4, N° 1, India : (2015) J17. [Ben Saber and Elloumi. 15b] : H. Ben Saber, M. Elloumi. Efficiently Mining Gene Expression Data via Novel Binary Biclustering Algorithm, Journal of Proteomics and Bioinformatics (JPB), S9: 008, Omics International : (March 2015). J16. [Ben Saber and Elloumi. 15a] : H. Ben Saber, M. Elloumi. New Study on Biclustering Tools, Biclusters Validation and Evaluation Functions, International Journal of Computer Science and Engineering Survey (IJCSES), Vol. 6, N°1 : (February 2015). J15. [Ben Nsira et al. 15] : N. Ben Nsira, Th. Lecroq, M. Elloumi, A Fast Pattern Matching Algorithm for Highly Similar Sequences, International Journal of Data Mining and Bioinformatics (IJDMB), Vol. 13, N°3, InderScience Publisher, Olney, Bucks, UK : (2015). • 2014 J14. [Ben Saber and Elloumi. 14] : H. Ben Saber, M. Elloumi. A Comparative Study of Clustering and Biclustering of Microarray Data, International Journal of Computer Science & Information Technology (IJCSIT), Vol 6, N° 6, AIRCC, Chennai, Tamil Nadu, India (Publish.) : (2014). • 2013 J13. [El Falah et al. 13] : T. El Faleh, Th. Lecroq, M. Elloumi, Extraction of Infrequent Simple Motifs from a Finite Set of Sequences using a Lattice Structure, Recent Patents on DNA and Gene Sequences, Vol. 7, No. 2, Bentham Science Publishers, Bussum, The Netherlands (Publisher) : (2013). • 2012 J12. [Ayadi et al. 12c] : W. Ayadi, M. Elloumi, J. K. Hao, BiMine+: An Efficient Algorithm for Discovering Relevant Biclusters of DNA Microarray Data, Knowledge Based Systems Journal, Vol. 15, Issue 4, Elsevier Publishing Co., Amsterdam, North-Holland (Publisher) : (May 2012). J11. [Ayadi et al. 12b] : W. Ayadi, M. Elloumi, J. K. Hao, Pattern-Driven Neighborhood Search for Biclustering of Microarray Data, BMC Bioinformatics, BioMed Central, Ltd., London, United Kingdom (Publisher) : (May 2012). J10. [Ayadi et al. 12a] : W. Ayadi, M. Elloumi, J. K. Hao, BicFinder: A Biclustering Algorithm for Microarray Data Analysis, Knowledge and Information Systems, An International Journal, Volume 30, Issue 2, Heidelberg, Germany (Publisher) : (January 2012), p341-358. • 2009 J9. [Ayadi et al. 09] : W. Ayadi, M. Elloumi, J. K. Hao, A Biclustering Algorithm Based on a Bicluster Enumeration Tree: Application to DNA Microarray Data, BioData Mining Journal, 2:9, Springer Science+Business Media, Berlin, Germany (Publish.) : (December 2009). • 2008 J8. [Elloumi and Mokaddem 08b] : M. Elloumi, A. Mokaddem, A Heuristic Algorithm for the N-LCS Problem, Journal of Applied Mathematics, Statistics and Informatics (JAMSI), Vol. 4, N°1, The University of Saint Cyril and Metodius, Trnava, Slovak Republic (Publisher) : (May 2008), p17-27. • 2006 J7. [Mhamdi et al. 06b] : F. Mhamdi, R. Rakotomalala, M. Elloumi, A Compromise between N-gram Length and Classifier Characteristics for Protein Classification, International Journal of Computer Science and Network Security, Vol. 6, N°4 : (April 2006). • 2005 J6. [Elloumi and Maddouri 05] : M. Elloumi, M. Maddouri, New Voting Strategies Designed for the Classification of Nucleic Sequences, Knowledge and Information Systems, An International Journal, Vol. 8, N°1, Springer, Heidelberger, Germany (Publish.) : (July 2005). • 2004 J5. [Maddouri and Elloumi 04] : M. Maddouri, M. Elloumi, Encoding of Primary Structures of Biological Macromolecules within a Data Mining Perspective, Journal of Computer Science and Technology, Vol. 19, N°1, Special Issue on Bioinformatics, Chinese Academy of Sciences, Beijing, China (Publisher) : (January 2004). • 2002 J4. [Maddouri and Elloumi 02] : M. Maddouri, M. Elloumi, A Data Mining Approach based on Machine Learning Techniques to Classify Biological Sequences, Knowledge Based Systems Journal, Vol. 15, Issue 4, Elsevier Publishing Co., Amsterdam, North-Holland (Publisher) : (May 2002), p217-223. • 2001 J3. [Elloumi 01b] : M. Elloumi, Algorithms for the Prediction of Secondary Structures of RNA Macromolecules, Journal of Computational Technologies, Vol. 6, N°5, Siberian Branch, Russian Academy of Sciences, Novosibirsk, Russia (Publisher) : (October 2001), p3-23. • 2000 J2. [Elloumi 00d] : M. Elloumi, Algorithms for the Shortest Exact Common Superstring Problem, South African Computer Journal, N°26, Computer Society of South Africa, Johannesbourg, South Africa (Publisher) : (November 2000), p22-26. • 1998 J1. [Elloumi 98b] : M. Elloumi, Comparison of Strings Belonging to the Same Family, Information Sciences, An International Journal, Vol. 111, Issue 1-4, Elsevier Publishing Co., Amsterdam, North-Holland (Publisher) : (November 1998), p49-63. Book Chapters • 2026 BC12. [Arya et al. 26b]: L. Arya, R. Rastogi, M. Sivaparvathi, R. B. Yallamanda, L. Banda, V. R. Katuri, D. Gautam, M. Elloumi, N. Tiwari, Sh. Tyagi, AI Integration in Telemedicine for Metabolic Monitoring and Gut Microbiome Analysis, Revolutionizing Metabolic Medicine With Artificial Intelligence, IGI Global, New York, USA (Publish.) : (January 2026). https://www.igi-global.com/viewtitle.aspx?TitleId=398555&isxn=9798337331966 BC11. [Arya et al. 26a]: L. Arya, E. S. Raju, M. V. S. Santosh, S. Kumar M.P.J., R. Rastogi, M. Elloumi, T. Arumugam, B. Namasivayam, Explainable Artificial Intelligence (XAI) for Ethical and Trustworthy Decision-Making in 6G Networks, 6G Networks and AI-Driven Cybersecurity, IGI Global, New York, USA (Publish.) : (January 2026). https://www.igi-global.com/viewtitle.aspx?TitleId=386422&isxn=9798337305684 • 2017 BC10. [Ben Nsira et al. 17] : N. Ben Nsira, Th. Lecroq, M. Elloumi, Index Structures for Combinatorial Problems in Highly Similar Biological Sequences, in Algorithms for Next-Generations Sequencing Data: Techniques, Approaches and Applications, Springer, Heidelberger, Germany (Publish.) : (September 2017). • 2016 BC9. [Aouled El Haj Mohamed et al. 16] : S. Aouled El Haj Mohamed, M. Elloumi and J. D. Thompson, Motif Discovery in Protein Sequences, in Pattern Recognition: Analysis and Applications, InTech, Rijeka, Croatia (Publish.) : (December, 2016). • 2014 BC8. [Ayadi et al. 14] : W. Ayadi, M. Elloumi, J. K. Hao, Systematic and Stochastic Biclustering Algorithms for Microarray Data Analysis, in Microarray Image and Data Analysis: Theory and Practice, CRC Press, Boca Raton, Florida, USA. (Publish.) : (January 2014). BC7. [Banka et al. 14] : H. Banka, S. Dara, M. Elloumi, Feature Selection and Classification for Gene Expression Data using Evolutionary Computation, in Biological Knowledge Discovery Handbook: Preprocessing, Mining and Postprocessing of Biological Data, Wiley Book Series on Bioinformatics: Computational Techniques and Engineering, Wiley-Blackwell, John Wiley & Sons Ltd., New Jersey, USA (Publish.) : (January 2014). BC6. [Elloumi et al. 14] : M. Elloumi, M. A. Issa, A. Mokaddem, Accelerating Pairwise Alignment Algorithms by Using Graphics Processor Units, in Biological Knowledge Discovery Handbook: Preprocessing, Mining and Postprocessing of Biological Data, Wiley Book Series on Bioinformatics: Computational Techniques and Engineering, Wiley-Blackwell, John Wiley & Sons Ltd., New Jersey, USA (Publish.) : (January 2014). BC5. [Valente-Freitas et al. 14] : A. Valente-Freitas, W. Ayadi, M. Elloumi, J. L. Oliveira, J. K. Hao, A Survey on Biclustering of Gene Expression Data, in Biological Knowledge Discovery Handbook: Preprocessing, Mining and Postprocessing of Biological Data, Wiley Book Series on Bioinformatics: Computational Techniques and Engineering, Wiley-Blackwell, John Wiley & Sons Ltd., New Jersey, USA (Publish.) : (January 2014). BC4. [Ben Saber et al.14] : H. Ben Saber, M. Elloumi, M. Nadif, Clustering of Microarray Data, in Biological Knowledge Discovery Handbook: Preprocessing, Mining and Postprocessing of Biological Data, Wiley Book Series on Bioinformatics: Computational Techniques and Engineering, Wiley-Blackwell, John Wiley & Sons Ltd., New Jersey, USA (Publish.) : (January 2014). • 2011 BC3. [Ayadi and Elloumi 11] : W. Ayadi, M. Elloumi, Biclustering of Microarray Data, in Algorithms in Computational Molecular Biology : Techniques, Approaches and Applications, Wiley Book Series on Bioinformatics : Computational Techniques and Engineering, Wiley-Blackwell, John Wiley & Sons Ltd., New Jersey, USA (Publish.): (January 2011). BC2. [El Faleh et al. 11a] : T. El Faleh, M. Elloumi, Th. Lecroq, Motif Finding Algorithms in Biological Sequences, in Algorithms in Computational Molecular Biology : Techniques, Approaches and Applications, Wiley Book Series on Bioinformatics : Computational Techniques and Engineering, Wiley-Blackwell, John Wiley & Sons Ltd., New Jersey, USA (Publish.) : (January 2011). BC1. [Mokaddem and Elloumi 11a] : A. Mokaddem, M. Elloumi, Algorithms for the Alignment of Biological Sequences, in Algorithms in Computational Molecular Biology : Techniques, Approaches and Applications, Wiley Book Series on Bioinformatics : Computational Techniques and Engineering, Wiley-Blackwell, John Wiley & Sons Ltd., New Jersey, USA (Publish.) : (January 2011). International Conferences • 2019 C38. [Amraoui et al. 19] : H. Amraoui, F. Mhamdi, M. Elloumi, Association Rule Mining Using Discrete Jaya Algorithm, in Proc. The 2019 International Conference on High Performance Computing & Simulation, HPCS’19 (Dublin, Ireland), IEEE Computer Society Press, Los Alamitos, California, USA, (Publish.) : (July 2019). C37. [Guannoni et al. 19] : N. Guannoni, F. Mhamdi, E. Weitschek, M. Elloumi, Novel algorithm to extract multiple solutions forRNA sequence classification problem Results on Gene Expression Data, in Proc. The 2019 International Conference on High Performance Computing & Simulation, HPCS’19 (Dublin, Ireland), IEEE Computer Society Press, Los Alamitos, California, USA, (Publish.) : (July 2019). • 2018 C36. [Kchouk et al. 18] : M. Kchouk, J. F. Gibrat, M. Elloumi, Suitable Overlapping Set Visualization Techniques and Their Application to Visualize Biclustering Results on Gene Expression Data, in Proc. 9th International Workshop on Biological Knowledge Discovery and Data Mining, BIOKDD'18, 29th International Conference on Database and Expert Systems Applications, DEXA'18 (Regensburg, Germany), IEEE Computer Society Press, Los Alamitos, California, USA, (Publish.) : (September 2018). • 2017 C35. [Kchouk et al. 17] : Kchouk, J. F. Gibrat, M. Elloumi, An Error Correction Algorithm for Next-Generation Sequencing Data, in Proc. 8th International Workshop on Biological Knowledge Discovery and Data Mining, BIOKDD'17, 28th International Conference on Database and Expert Systems Applications, DEXA'17 (Lyon, France), IEEE Computer Society Press, Los Alamitos, California, USA, (Publish.) : (September 2017). • 2016 C34. [Kchouk and Elloumi 16] : Kchouk, M. Elloumi, Hybrid Error Correction Approach and DeNovo Assembly for MinIon Sequencing Long Reads, in Proc. IEEE International Conference on Bioinformatics and Biomedicine, BIBM'16, (Shenzhen, China), IEEE Computer Society Press, Los Alamitos, California, USA, (Publish.) : (December 2016). • 2015 C33. [Ben Saber and Elloumi 15] : H. Ben Saber, M. Elloumi, An Enumerative Biclustering Algorithm for DNA Microarray Data, in Proc. 15th IEEE International Conference on Data Mining (ICDM’15) (Atlantic City, NJ, USA), IEEE Computer Society Press, Los Alamitos, California, USA, (Publish.): (November 2015). C32. [Ben Saber and Elloumi 15] : H. Ben Saber, M. Elloumi, A Hybrid Possibilistic Algorithm for Biclustering : Application to Microarray Data Analysis, in Proc. 6th International Workshop on Biological Knowledge Discovery and Data Mining, BIOKDD'15, 26th International Conference on Database and Expert Systems Applications, DEXA'15 (Valencia, Spain), IEEE Computer Society Press, Los Alamitos, California, USA, (Publish.) : (September 2015). • 2014 C31. [Ben Nsira et al. 14] : N. Ben Nsira, Th. Lecroq, M. Elloumi, On-line String Matching in Highly Similar DNA Sequences, in Proc. The 2nd International Conference on Algorithms for Big Data, ICABD'14 (Palermo, Italy) : (April 2014). • 2013 C30. [Elloumi et al. 13] : M. Elloumi, P. Hayati, C. S. Iliopoulos, J. A. Mirza, S. P. Pissis, A. Shah, Comparison for the Detection of Virus and Spam using Pattern Matching Tools, in Proc. The International Conference on Technological Advances in Electrical, Electronics and Computer Engineering, TAEECE'13 (Konya, Turkey) : (May 2013). C29. [Mokaddem and Elloumi 13] : A. Mokaddem, M. Elloumi, Motalign: A Multiple Sequence Alignment Algorithm Based on a New Distance and a New Score Function, in Proc. 4th International Workshop on Biological Knowledge Discovery and Data Mining, BIOKDD'13, 24th International Conference on Database and Expert Systems Applications, DEXA'13 (Prague, Czech Republic), IEEE Computer Society Press, Los Alamitos, California, USA, (Publish.) : (August 2013). • 2012 C28. [Elloumi et al. 12] : M. Elloumi, P. Hayati, C. S. Iliopoulos, S. P. Pissis, A. Shah, Detection of Fixed length Web Spambot using REAL (Read Aligner), in Proc. The International Information Technology Conference & Exhibition, CUBE’12 (Pune, India), ACM International Conference Proceeding Series (ICPS), New York, USA (Publish.) : (September 2012). C27. [Mokaddem and Elloumi 12] : A. Mokaddem, M. Elloumi, New Distances For Improving Progressive Alignment Algorithm, in Proc. The 2nd International Conference on Advances in Computing and Information Technology, ACITY’12 (Chennai, India), Lecture Notes in Computer Science (LNCS), Springer-Verlag, Heidelberg, Germany (Publish.) : (July 2012). • 2011 C26. [Mokaddem and Elloumi 11b] : A. Mokaddem, M. Elloumi, PAAA: A Progressive Iterative Alignment Algorithm Based on Anchors, in Proc. The 6th IAPR International Conference on Pattern Recognition in Bioinformatics, PRIB'11 (Delft, The Netherlands), Lecture Notes in BioInformatics (LNBI), Springer-Verlag, Heidelberg, Germany (Publish.) : (November 2011). C25. [El Faleh et al. 11c] : T. El Faleh, Th. Lecroq, M. Elloumi, Experimental Evaluation of Fast Solution Algorithms for the Simple Motif Problem, in Proc. 1st International Conference on Computer Science, Engineering and Information Technology, CCSEIT'11 (Tirunelveli, Tamil Nadu, India), Communications in Computer and Information Science (CCIS) Series, Springer-Verlag, Heidelberg, Germany (Publish.) : (September 2011). C24. [Ben Saber et al. 11] : H. Ben Saber, M. Elloumi, M. Nadif, Block Mixture Model for the Biclustering of Microarray Data, in Proc. 2nd International Workshop on Biological Knowledge Discovery and Data Mining, BIOKDD'11, 22nd International Conference on Database and Expert Systems Applications, DEXA'11 (Toulouse, France), IEEE Computer Society Press, Los Alamitos, California, USA, (Publish.) : (September 2011). C23. [El Faleh et al. 11b] : T. El Faleh, Th. Lecroq, M. Elloumi, An Efficient Motif Search Algorithm Based on a Minimal Forbidden Patterns Approach, in Proc. 5th International Conference on Practical Applications of Computational Biology & Bioinformatics, PACBB'11 (Salamanca, Spain), Advances in Intelligent and Soft-Computing Series, Springer-Verlag, Heidelberg, Germany (Publish.) : (April 2011). • 2010 C22. [Ayadi et al. 10] : W. Ayadi, M. Elloumi, J. K. Hao, Iterated Local Search for Biclustering of Microarray Data., in Proc. The 5th IAPR International Conference on Pattern Recognition in Bioinformatics 2010, PRIB’10, (Nijmegen, The Netherlands), Lecture Notes in BioInformatics (LNBI), Springer-Verlag, Heidelberg, Germany (Publish.) : (September 2010). C21. [Elloumi et al. 10] : M. Elloumi, F. Mhamdi, W. Trabelsi, Processus d’Extraction de Motifs Biologiques Pertinents, in Proc. 17ème Rencontres de la Société Francophone de Classification, SFC’10 (Saint Denis, La Réunion, France) : (June 2010). C20. [El Faleh et al. 10] : T. El Faleh, Th. Lecroq, M. Elloumi, SMS-Forbid: An Efficient Algorithm for Simple Motif Problem, in Proc. 2nd International Conference on Bioinformatics and Computational Biology, BICoB’10 (Honolulu, Hawaii, USA) : (March 2010). • 2009 C19. [Mhamdi and Elloumi 09] : F. Mhamdi, M. Elloumi, Algorithms for Proteins Biclustering, in Proc. The 2009 IEEE International Workshop on Bioinformatics and Life Science Modeling and Computing, BLSMC’09, (Bradford, UK), IEEE Computer Society Press (Publish.) : (May 2009). C18. [Elloumi and Mnif 09b] : M. Elloumi, A. Mnif, New Heuristic Algorithms for the Optimization Vertex Bipartization Problem, in Proc. The 45th Applied Mathematics Conference, ANZIAM’09 (Caloundra, Australia) : (February 2009). C17. [Elloumi and Mnif 09a] : M. Elloumi, A. Mnif, New Minimum Fragment Removal Heuristic Algorithms Based on a Coloring Approach, in Proc. The International Conference on Advanced Computer Control, ICACC’09 (Singapore) : (January 2009). • 2008 C16. [Mhamdi and Elloumi 08b] : F. Mhamdi, M. Elloumi, Approaches of Feature Construction from Biological Sequences, in Proc. The 3rd IAPR International Conference on Pattern Recognition in Bioinformatics, PRIB’08 (Melbourne, Australia), Lecture Notes in BioInformatics (LNBI), Springer-Verlag, Heidelberg, Germany (Publish.) : (Octobre 2008). C15. [Elloumi and Mokaddem 08c] : M. Elloumi, A. Mokaddem, An Algorithm for Multiple and Global Alignments, in Proc. The 2nd International Conference on Bioinformatics Research and Development, BIRD’08 (Vienna, Austria), Communications in Computer and Information Science (CCIS), Springer-Verlag, Heidelberg, Germany (Publish.) : (July 2008). C14. [Tahri and Elloumi 08] : H. Tahri, M. Elloumi, A New Approximation Algorithm for the Minimum Fragment Removal Problem, in Proc. The 2nd International Conference on Bioinformatics Research and Development, BIRD’08 (Vienna, Austria), Communications in Computer and Information Science (CCIS), Springer-Verlag, Heidelberg, Germany (Publish.) : (July 2008). C13. [Mhamdi and Elloumi 08a] : F. Mhamdi, M. Elloumi, A New Survey on Knowledge Discovery and Data Mining, in Proc. The Second IEEE International Conference on Research Challenges in Information Science, IEEE-RCIS’08 (Marrakech, Morocco), IEEE Computer Society Press (Publish.) : (June 2008). C12. [Elloumi and Mokaddem 08a] : M. Elloumi, A. Mokaddem, A Dynamic Programming Algorithm for the Approximate String-Matching Problem, in Proc. The 2008 IEEE International Workshop on Bioinformatics and Life Science Modeling and Computing, IEEE-BLSMC’08 (GinoWan, Okinawa, Japan), IEEE Computer Society Press, Los Alamitos, California, USA, (Publish.): (March 2008). • 2006 C11. [Mhamdi et al. 06c] : F. Mhamdi, R. Rakotomalala, M. Elloumi, A Hierarchical N-Grams Extraction Approach for Classification Problem, in Proc. The 2006 IEEE/ACM International Conference on Signal-Image Technology and Internet-based Systems, IEEE/ACM SITIS'06 (Hammamet, Tunisia), Lecture Notes in Computer Science (LNCS), Springer-Verlag, Heidelberg, Germany (Publish.) : (December 2006). C10. [Elloumi 06] : M. Elloumi, Algorithms for Processing Biological Sequences, in Proc. 1st Tunisian-German Workshop on Bioinformatics (Borj-Cédria, Tunisia) : (Septembre 2006). C9. [Mhamdi et al. 06a] : F. Mhamdi, M. Elloumi, R. Rakotomalala, Extraction et Sélection des N-Grammes pour le Classement des Protéines, in Proc. Atelier Extraction et Gestion des Connaissances Appliquées aux Données Biologiques, BIO-EGC’06 (Lille, France) : (January 2006). • 2005 C8. [Mhamdi et al. 05] : F. Mhamdi, R. Rakotomalala, M. Elloumi, Feature Ranking for Protein Classification, in Proc. 4th International Conference on Computer Recognition Systems, CORES'05 (Leszno, Poland), Lecture Notes in Computer Science (LNCS), Springer-Verlag, Heidelberg, Germany (Publish.) : (May 2005). • 2003 C7. [Elloumi and Maddouri 03] : M. Elloumi, M. Maddouri, A Data Mining Approach based on Vote Strategies to Classify Biological Sequences, in Proc. Workshop on Discrete Mathematics and Data Mining (DM&DM), Third Society for Industrial and Applied Mathematics (SIAM) International Conference on Data Mining (San Francisco, California, USA) : (May 2003). • 2001 C6. [Maddouri and Elloumi 01] : M. Maddouri, M. Elloumi, Classification of Biological Sequences by using a Data Mining Approach, in Proc. of The 2001 International Conference on Mathematics and Engineering Techniques in Medicine and Biological Sciences, METMBS'01 (Las Vegas, Nevada, USA) : (June 2001). • 2000 C5. [Elloumi 00b] : M. Elloumi, Algorithms for the DNA Sequence Assembly Problem, in Proc. of 4th World Conference on Systematics, Cybernetics and Informatics, and 6th International Conference on Information Systems Analysis and Synthesis, SCI2000/ISAS2000, Session : SCI in Biology and Medicine (Orlando, Florida, USA), International Institute of Informatics and Systemics, Illinois, USA (Eds.) : (July 2000). C4. [Elloumi 00a] : M. Elloumi, DNA Sequence Assembly Algorithms Based on Clustering Approaches, in Proc. of The 2000 International Conference on Mathematics and Engineering Techniques in Medicine and Biological Sciences, METMBS'00, Vol. II (Las Vegas, Nevada, USA) : (June 2000), p717-723. C3. [Elloumi and Maddouri 00] : M. Elloumi, M. Maddouri, Discrimination Between Two Families of Strings: Application to Classification of Primary Structures of Biological Macromolecules, in Proc. of 2nd International Workshop on Biological Informatics, BIW'2000, Vol. II (Atlantic City, New Jersey, USA) : (February 2000), p819-822. C2. [Barouni and Elloumi 00] : A. Barouni, M. Elloumi, An Algorithm for Drawing Normal Representation of RNA Secondary Structures, in Proc. of 2nd International Workshop on Biological Informatics, BIW'2000 Vol. II (Atlantic City, New Jersey, USA) : (February 2000), p766-769. • 1998 C1. [Elloumi 98] : M. Elloumi, New Algorithms to Predict Secondary Structures of RNA Macromolecules, in Proc. of 11th International Conference on Industrial and Engineering Applications of Artificial Intelligence and Expert Systems, IEA/AIE'98, Vol. 1 (Benicassim, Castellon, Spain), Lecture Notes in Artificial Intelligence (LNAI), Springer-Verlag, Heidelberg, Germany (Publish.) : (June 1998), p864-875.

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